Protein Information

Protein ZmbZIP48
ZmbZIP48 is a protein in the bZIP family.
Information
TF Name:	ZmbZIP48
Species:	Maize
TF Family:	bZIP
Gene Name(Synonym):	BZIP48
Uniprot ID:	A0A1D6PDQ1
Subgenome:	2

ZmbZIP48 is a protein in the bZIP family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
	PF00170	PF07716
Zm00001eb136980_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Gene ID	Type	Sequence	FIMO	Position
Zm00001d041604	DAPseq	sequence	fimo	position
Zm00001d041604	DAPseq	sequence	fimo	position
Zm00001d041604	ChIPseq	sequence	fimo	position
Zm00001d041604	PChIPseq	sequence	fimo	position

Interactions where ZmbZIP48 is the regulator

There are no protein-dna interactions that fit this criteria.

Interactions where ZmbZIP48 is the target
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There are 132 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb136980_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MSSSSLSPAGRTSGSDGDSAADTRRREKRRLSNRESARRSRLRKQQHLDELAQEAALLQAENARVAARAADVASQNARVE
QENAVLRARAAELGARLRSVNEVLRVVEEFSGVAMDIQEEVPPADDPLLRPWQLPCYPAAAMPIGAPHMLRY

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00170
PF07716
PF07716
PF00170
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Nucleotide Sequence
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CTCTCTCTCTCTCTCTCTCTCTCTC...

GRMZM2G160902_T01 from maize genome v3

Related TFome: pUT5463

Amino Acid Sequence
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MSSSSLSPAGRTSGSDGDSAADTRRREKRRLSNRESARRSRLRKQQHLDELAQEAALLQAENARVAARAADVASQNARVE
QENAVLRARAAELGARLRSVNEVLRVVEEFSGVAMDIQEEVPPADDPLLRPWQLPCYPAAAMPIGAPHMLRY

Nucleotide Sequence
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ATAAATACCATGTTACGGTCCAATT...

Zm00001d041604_T001 from maize genome v4

Amino Acid Sequence
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MSSSSLSPAGRTSGSDGDSAADTRRREKRRLSNRESARRSRLRKQQHLDELAQEAALLQAENARVAARAADVASQNARVE
QENAVLRARAAELGARLRSVNEVLRVVEEFSGVAMDIQEEVPPADDPLLRPWQLPCYPAAAMPIGAPHMLRY

Nucleotide Sequence
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ATGTCGTCGTCGTCGCTGTCGCCGG...

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Protein ZmbZIP48

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmbZIP48 is the regulator

Interactions where ZmbZIP48 is the target
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Zm00001eb136980_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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Expand

GRMZM2G160902_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d041604_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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